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  1. forestglip

    Structured Exercise after Adjuvant Chemotherapy for Colon Cancer 2025 Courneya et al

    That seems accurate. 7% reduction in absolute risk, but that's influenced by how rare or common the event of dying in that timeframe is in general. But if ~17% of people died in the control group and ~10% died with exercise, that's more than a third less that died over the 8 years. And the...
  2. forestglip

    United Kingdom: ME Research UK (MERUK) News

    ME Research UK – May e-newsletter Articles Link
  3. forestglip

    Hypothesis Perspective: host factors variants and the underlying causes of long COVID, 2025, Pasharawipas

    Perspective: host factors variants and the underlying causes of long COVID Tirasak Pasharawipas Long COVID, also known as post-COVID syndrome (PCS), is characterized by persistent and unexplained symptoms that can occur not only in individuals who experienced severe symptoms during the acute...
  4. forestglip

    Preprint Charting the Circulating Proteome in ME/CFS: Cross System Profiling and Mechanistic insights, 2025, Hoel, Fluge, Mella+

    R stresses me out because I'm not very familiar with it, so when I'm not in a patient mood I just use Python. Computer's away for the night, but I'll do a linear model tomorrow.
  5. forestglip

    Preprint Charting the Circulating Proteome in ME/CFS: Cross System Profiling and Mechanistic insights, 2025, Hoel, Fluge, Mella+

    Here's with merging on all rows from both studies using TargetFullName. Spearman r of .23
  6. forestglip

    Preprint Charting the Circulating Proteome in ME/CFS: Cross System Profiling and Mechanistic insights, 2025, Hoel, Fluge, Mella+

    Yes the fact that this is not a thing has been irritating me all day as I crudely try to match up genes from one study with a single other study. It basically feels like it would be free data if such a database existed. There are many 'omics studies that would be great to cross-reference...
  7. forestglip

    Preprint Charting the Circulating Proteome in ME/CFS: Cross System Profiling and Mechanistic insights, 2025, Hoel, Fluge, Mella+

    Since they did the validation portion, it seemed worth checking if there was overlap between the 57 proteins in that part with the thousands in the first part and in Germain. There were overlaps in 51 genes between all three cohorts. In 19 genes, the fold change was in the same direction. Only...
  8. forestglip

    Preprint Charting the Circulating Proteome in ME/CFS: Cross System Profiling and Mechanistic insights, 2025, Hoel, Fluge, Mella+

    @ME/CFS Skeptic My plot looks the same by the way. Here are the three genes that were changed in the same direction in both studies and had a q value less than .05 in both: Edit: Added links to GeneCards.
  9. forestglip

    Preprint Charting the Circulating Proteome in ME/CFS: Cross System Profiling and Mechanistic insights, 2025, Hoel, Fluge, Mella+

    I think TargetFullName might be best actually. Multiple aptamers can be associated with the same gene identifier, but I assume they each have a unique TargetFullName. If matching on UniProt, if either dataset has multiple aptamers per UniProt ID, you'll get arbitrary pairs of measurements...
  10. forestglip

    Preprint Charting the Circulating Proteome in ME/CFS: Cross System Profiling and Mechanistic insights, 2025, Hoel, Fluge, Mella+

    Oh, another identifier, didn't notice that one. I do get 672 with that. I'm going to try merging where any of the columns match. Could you explain this a bit more:
  11. forestglip

    Preprint Charting the Circulating Proteome in ME/CFS: Cross System Profiling and Mechanistic insights, 2025, Hoel, Fluge, Mella+

    I'm running into the issue when merging with an inner join of not having a consistent identifier. If I merge on 'UniProt', I get 682 rows. If I merge on 'EntrezGeneSymbol' I get 655. If I merge on 'EntrezGeneID', I get 631. Not sure how yours is different from all of these. It's different...
  12. forestglip

    IgA autoimmunity and coagulation among [PASC] patients with persistent respiratory symptoms: a case-control study, 2025, Gomes et al

    IgA autoimmunity and coagulation among post-acute sequelae of SARS-CoV-2 infection (PASC) patients with persistent respiratory symptoms: a case-control study Claudia Gomes, Jonathan H. Whiteson, Fabio Ponzo, Rany Condos, Mila B. Ortigoza, Marisol Zuniga, Ana Rodriguez, David C. Lee [Line...
  13. forestglip

    Preprint Charting the Circulating Proteome in ME/CFS: Cross System Profiling and Mechanistic insights, 2025, Hoel, Fluge, Mella+

    I was looking at that, wondering if BMI was the reason for the increase (matched for sex), but they seem pretty closely matched for BMI as well: HC: 24.0±2.6 ME/CFS: 24.4±4.2 Maybe the larger variance in BMI in the ME/CFS group could affect things? Edit: Oh, not perfectly matched for sex like...
  14. forestglip

    Symptoms and Pathophysiology of Post-Acute Sequelae of SARS-CoV-2 (PASC): A Cohort Study, 2024, Robineau et al

    Now published. In terms of the abstract, other than minor spelling and formatting changes, the only change was removing the mention of IL-8. ---- Background Several studies reported long-term consequences of severe COVID-19. However, pathophysiological mechanisms of Post-Acute Sequelae...
  15. forestglip

    Exploring Genetic Susceptibility to Internalizing Symptoms within the DSM: Network Analysis, 2025, Sadiković et al

    Exploring Genetic Susceptibility to Internalizing Symptoms within the DSM: Network Analysis Selka Sadiković, Ljiljana Mihić, Radomir Belopavlović, Bojana M. Dinić, Nada Tokodi, Nataša Vučinić, Mechthild Prinz, Zoran Budimlija & Snežana Smederevac [Line breaks added] Abstract This study...
  16. forestglip

    Preprint Charting the Circulating Proteome in ME/CFS: Cross System Profiling and Mechanistic insights, 2025, Hoel, Fluge, Mella+

    54 ME/CFS and 27 HC. 6494 proteins tested. 751 with significant q values. Down: intracellular proteins, including histones, metabolic enzymes | Up: immune system, metabolism | Up or down: vascular function Controlling for metabotype (what is metabotype?) and SF-36 physical function score...
  17. forestglip

    Hypothalamic-pituitary-adrenal Axis in Patients Presenting to Psychosomatic Medicine with Fatigue, 2025, Matsubayashi et al

    That's interesting. Hydrocortisone cured her fear of gaining weight? I feel like anorexia is one of the best examples of a condition your doctor would send you to a therapist to fix, yet a cheap medication did the job.
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