Protocol Serial Paediatrics Omics Tracking in [ME] (SPOT-ME): protocol paper for a multidisciplinary, observational study..., 2024, Armstrong+

Discussion in 'ME/CFS research' started by Nightsong, Dec 11, 2024.

  1. Nightsong

    Nightsong Senior Member (Voting Rights)

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    Abstract
    Introduction Myalgic encephalomyelitis/chronic fatigue syndrome (ME/CFS) is a disabling condition that can affect adolescents during a vulnerable period of development. The underlying biological mechanisms for ME/CFS remain unclear and have rarely been investigated in the adolescent population, despite this period representing an age peak in the overall incidence. The primary objective of this is to provide a foundational set of biological data on adolescent ME/CFS patients. Data generated will be compared with controls and over several time points within each patient to potentially develop a biomarker signature of the disease, identify subsets or clusters of patients, and to unveil the pathomechanisms of the disease.

    Methods and analysis This protocol paper outlines a comprehensive, multilevel, longitudinal, observational study in paediatric ME/CFS. ME/CFS patients aged 12–19 years and controls will donate biosamples of urine, blood, and peripheral blood mononuclear cells for an in-depth omics profiling analysis (whole-genome sequencing, metabolomics and quantitative proteomics) while being assessed by gold-standard clinical and neuropsychological measures. ME/CFS patients will then be provided with a take-home kit that enables them to collect urine and blood microsamples during an average day and during days when they are experiencing postexertional malaise. The longitudinal repeated-measures study design is optimal for studying heterogeneous chronic diseases like ME/CFS as it can detect subtle changes, control for individual differences, enhance precision and boost statistical power. The outcomes of this research have the potential to identify biomarker signatures, aid in understanding the underlying mechanisms, and ultimately, improve the lives of children with ME/CFS.

    Link | PDF (BMJ Open, December 2024, open access)
     
  2. Hutan

    Hutan Moderator Staff Member

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    Thank you Chris, @MelbME, and team. Great to see this.

    I thought this study was well underway? The good day, bad day study in adolescents? Is this just the delay in getting the protocol through the publishing process?

    I like the description of ME/CFS in this paper, better than what was used in the (mostly otherwise very good) UK Biobank paper. I noticed you mentioned the twin peak idea in that paper too, here it is in this paper:
    I think the evidence for the twin peaks is very weak, and it's not as if there are not a significant number of onsets in people in their twenties, or even in people older than 39. You say that ME/CFS affects individuals in all age groups, so I really don't think mentioning the twin peaks idea (which probably amounts to a myth created by frequent repeating) adds anything.
     
    Last edited: Dec 11, 2024
  3. Hutan

    Hutan Moderator Staff Member

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    I'm not sure what you mean by 'illness process'. I interpret that as meaning severity, symptoms and e.g. eventual outcome (recovery, worsening) rather than risk factors for onset. The paper has already noted the 'notable female preponderance'.

    ref 2 is the Bakken Twin Peaks paper, I don't think it says anything about a sex difference in the illness process, just some differences that they found in the incidence ages.

    ref 7 is a paper about the developing adolescent brain and doesn't talk about ME/CFS or CFS at all. Was this reference meant to be somewhere else? (probably the next sentence)

    ref 8 is the 2019 UK ME/CFS Biobank study of risk factors. They found that younger age was associated with severity, but they did not report finding that sex was associated with severity or any particular symptomology. The only sex difference they mention is in prevalence, and they note that there are biases that may be inflating that.

    ref 9 is
    'The underlying sex differences in neuroendocrine adaptations relevant to Myalgic Encephalomyelitis Chronic Fatigue Syndrome'
    by some of the authors of this protocol. I guess it's a valid reference for the claim, but I couldn't see anything much in the paper that wasn't speculation or a result from small or otherwise weak studies. Of course it's likely that the menstrual cycle affects symptomology somewhat, but I doubt that it amounts to a difference in illness process. Yes, pregnancy may affect ME/CFS, but I don't think we yet have a clear understanding even of what percentage of people improve, what percentage deteriorate, let alone what might be influencing that change. I haven't yet seen good evidence for any sex differences in ME/CFS (other than probably incidence) that aren't likely to be rather downstream of the core disease process.

    There's also a great deal written about cortisol in that paper (as well as the latest UK Biobank paper). Please read the commentary here on the cortisol studies that are cited - the evidence for cortisol being a core part of ME/CFS pathology is, I think, unconvincing. Happy to discuss more if anyone is interested.
     
    Last edited: Dec 11, 2024
  4. MelbME

    MelbME Senior Member (Voting Rights)

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    Yes it's well underway, recruitment ends very soon and data analysis will begin.

    Yes protocol paper took a while to get published but we persisted for simplicity, there will probably be 5+ papers from this.

    Yeah it would be good to have more data on the age of onset to see if the peaks hold for females.

    We do try change up the descriptions of ME/CFS from paper to paper, otherwise it feels a bit formulaic. But I appreciate the feedback though, are there any particular papers that you feel did a great introduction to ME/CFS?
     
  5. MelbME

    MelbME Senior Member (Voting Rights)

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    The illness process is a broad term to cover many aspects of difference. I believe that part was initially a lot longer and shortened down. It's effectively meant to represent differences between females and males.

    We do have a growing interest in the neuroendocrine role in ME/CFS and long COVID. A project is in recruitment looking at this. We're not exactly convinced of cortisol changes either but we are interested in the possibility. Particularly interested in the impact of a rising and falling estrogen and progesterone.

    I'm interested to hear more about your thoughts on cortisol. Not a lot of well designed studies in ME, not a lot well designed in non-ME research either.
     
  6. Hutan

    Hutan Moderator Staff Member

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    I've started jotting down my thoughts and summaries of forum analyses of papers relevant to the 'cortisol in ME/CFS' question here:
    Cortisol levels in ME/CFS
     
  7. Hutan

    Hutan Moderator Staff Member

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    You got it into the BMJ, congratulations. I assume it is then easier to get your subsequent papers into that journal?

    Formulaic but accurate is fine by me. @Ravn had some good comments somewhere, arising from some discussion about a recent paper from Ponting's team. We concluded that short is good - there's no need to give readers a very detailed explanation of ME/CFS especially as anyone trying to give a lot of detail usually ends up speculating and saying things that are not well evidenced. I'll see if I can find the thread.


    Just on the apparent peak in the 10 to 20 age period: it might well be true.

    The effort of growing in those years is surely a major stressor. I harbour a suspicion that my daughter recovered from ME/CFS after a couple of years whereas my son (who became ill at the same time) did not because, by onset, she had past the time of her growth spurt. Whereas my son's onset was when he was 13. When he was 14 and growing rapidly, his illness worsened greatly and he ended up sleeping 20 hours a day for a month.

    It's also a time when a lot of people get EBV, which of course seems to be a common trigger of ME/CFS.

    Also, I expect that children who actually have an ME/CFS onset as a young child, less than 10 years old, probably take a long time to be diagnosed. It's harder when the child can't exactly say what is wrong, even with a well-defined illness. So, if a child developed ME/CFS at age 8, I reckon they might have to jump through all sorts of accusations of school phobia and parental facilitation and probably would not be diagnosed until that 10-20 age bracket.
     
    Last edited: Dec 13, 2024
  8. Hutan

    Hutan Moderator Staff Member

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    The thread I mentioned:
    How to write a good introduction for an ME/CFS paper?
     
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  9. forestglip

    forestglip Senior Member (Voting Rights)

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    Plain language summary of this protocol from OMF newsletter:

    -------

    "The Serial Pediatrics Omics Tracking in Myalgic Encephalomyelitis (SPOT-ME) study explores clinical and biological factors in Myalgic Encephalomyelitis/Chronic Fatigue Syndrome (ME/CFS) among adolescents aged 12–19, a critical time when this illness can seriously affect education, social life, and overall development and well-being. To date, very little biological data have been produced on young people with ME/CFS, this work aims to change that and provide a detailed picture of this disease.

    ME/CFS patients and healthy control participants will attend a single clinical visit for initial evaluation. Afterward, those with ME/CFS will provide dried blood and urine samples and complete symptom surveys at home over several months. Sampling on both “typical” days and “crash” days, when symptoms markedly worsen, will allow us to detect biological changes driving these episodes.

    Our work represents one of the most extensive examinations of pediatric ME/CFS to date. By integrating extensive biological data with clinical evaluations, we aim to provide a clearer picture on the impact of ME/CFS in pediatric patients and to better understand the mechanism of the disease.

    The purpose of a protocol paper is to outline the research question, methodology, data analysis plan, and ethical considerations. Subsequent papers will share the results of this research."
     
  10. Hutan

    Hutan Moderator Staff Member

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    @MelbME, did you have any comments on the lack of evidence for cortisol being a problem in ME/CFS?

    I think the plain language summary rather glosses over the significant use of surveys to gather information about the psychological status of the young people in this project. We've said it before, psychological information seems so often to be the tax that has to be paid in order to get decent biological studies. This study is no exception.

    These are some of the the surveys that the protocol says will be applied.


    Re HADS and it having been recommended as a mood screening tool in ME/CFS: Reference 42 is
    Deale A, Husain K, Chalder T, et al. 2001, Long-term outcome of cognitive behavior therapy versus relaxation therapy for chronic fatigue syndrome: a 5-year follow-up study.
    That's hardly a reliable recommendation. It's easy to think that these surveys are a lot more scientific than they actually are. MelbME, if you haven't already, please do the surveys yourself, imagining that you are a young person with ME/CFS.

    Have a look at this thread on HADS
    The Hospital Anxiety and Depression Scale (HADS) - a discussion
    Towards the end of that thread, there are links to a number of papers that found that HADS is not suitable in chronic disease and specifically not in ME/CFS.

    I don't think we have discussion threads on the other two surveys yet.

    The results from flawed surveys have the potential to do a lot of harm. They have been used to cause harm. I really hope that your patient advisory panel are monitoring issues related to the use of these surveys closely and that they will be given the chance to scrutinise anything planned to be published about the results.
     
    Last edited: Jan 17, 2025
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  11. Hutan

    Hutan Moderator Staff Member

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    @MelbME, I wonder if your team has really thought carefully about why they need to do those surveys I listed above in a project that is tracking omics? If you want to track mood or cognitive ability against levels of various molecules, why not just ask the young person and their parent that directly? You can ask a few questions on an app such as 'do you feel happy today?', 'does you child seem happy today?'; 'are you thinking well today?' or even assess reaction times frequently, so that you can correlate mood and function with your omics results.

    You can't expect parents to fill out a 173 item questionnaire with questions about whether the child is internalising or externalising problems, followed by a 63 item questionnaire covering questions about whether the child appears inhibited every day. So, what is the point of these surveys?

    I understand that funding was gained with the protocol as it is, and you have Sarah Knight and her team waiting for the data from the surveys. But I think it is worth considering if it is really ethical and even scientifically valid to be collecting this information about young people.

    The parents and young people who are taking part in your study are not likely to be representative of young people with ME/CFS and their parents generally in terms of behaviour. So, what will these surveys really tell you about young people with ME/CFS?

    If you want to assess things like working memory, aren't direct measure less biased than a report from a parent?
     
  12. Hutan

    Hutan Moderator Staff Member

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    I've made a thread to look more closely at the second survey there:
    Behaviour Assessment System for Children, BASC - a discussion
    It has questions that assess, among other things, somatisation and withdrawal.

    Chris, @MelbME, can you tell us what is your team doing to ensure that this survey is safe for the families participating in your study and for the ME/CFS community who will be affected by any resulting papers drawing conclusions about the personalities and behaviours of young people with ME/CFS?

    Why is it appropriate to assess somatisation and withdrawal in an 'omics project? Have the questions or scoring system been modified to take into account the constraints and real symptoms young people with ME/CFS endure?

    Have participants (both parents and young people) been fully informed that somatisation and other psychological pathologies are being assessed in this project? Were your patient advisory panel members involved in the development of the protocol? Were they and are they aware that an assessment of somatisation is part of the project? Were they, are they, comfortable with that?
     
    Last edited: Jan 17, 2025
  13. Trish

    Trish Moderator Staff Member

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    @MelbME.
    I share Hutan's serious concerns about using psychobehavioural questionnaires on children with ME/CFS and their families. If my child had been intending to take part in an omics ME/CFS study and we'd been confronted with these questionnaires I would have withdrawn them from participation.

    I think it's unethical, and impossible to give informed consent in advance of participation because the participants can't be fully informed in advance what (likely false and damaging) conclusions may be drawn from them.
     
  14. Jonathan Edwards

    Jonathan Edwards Senior Member (Voting Rights)

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    I would echo this concern. Why is an omics study in ME/CFS including a psychological enquiry? Somatisation is, as far as I am concerned, a bogus psychologists' concept that we should stay a million miles away from. I haven't seen the detail but it looks seriously intrusive and definitely unethical. This sort of stuff so easily slips through as 'standard procedure' when it has no business to. To ask a parent/carer to make assessments of a child's behaviour seems to me very wrong. If it is supposed to have a role in care that might be justified but no way can bit be justified in the context of scientific enquiry that is not part of clinical care.
     
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  15. Utsikt

    Utsikt Senior Member (Voting Rights)

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    When can it be justified as a part of care?

    My personal experience as a 29 yo «child» to my parents is that every single question from healthcare workers to my parents about my mental health has created enormous issues for me. I had to get my therapist (phd) to write a statement to get them (and my GP) to stop nagging me about my mental health.

    Most parents have no clue whatsoever about what a «reasonable» or «healthy» response to ME/CFS or severe chronic illness looks like, and they’ll jump at anything any professional dangles in front of them because maybe that thing can be fixed and make the child better. Most therapists don’t know either - I’m lucky with mine.

    Apologies for the rant, I wanted to illustrate my point..
     
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  16. Yann04

    Yann04 Senior Member (Voting Rights)

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    Yes I assume due to various biases present in the doctors and the general BPS influenced discourse around ME, my parents and family have often assumed I have mental problems when I don’t feel like I do.
     
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  17. Utsikt

    Utsikt Senior Member (Voting Rights)

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    It sucks - I’m sorry you experience it as well.

    They also don’t understand how traumatizing gaslighting has been and why I’m extremly critical of anything that’s being said about me or my illness. Even though I’m bedbound because of the gaslighting. I don’t over-focus or catastrophize, I protect myself.

    There are only two people I would trust to say anything to anyone on my behalf - both are close friends with chronic illnesses.

    I’m getting a bit off track, but I hope this can serve as an example for why those surveys might be a terrible idea.
     
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  18. MelbME

    MelbME Senior Member (Voting Rights)

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    Lack of evidence for cortisol is similar to most other findings. We have threads that we have to pull on a little more to get that evidence. Is it real information or is it not?

    The scales are standardised way to get information on behaviour and mood from this population. These standard scales allow you to compare to other diseases. As opposed to just asking any random question, which is fine if consistent, but you limit the ways you can discuss the data point and what it means if you don't use standard scales.
     
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  19. MelbME

    MelbME Senior Member (Voting Rights)

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    This is a collaboration between us and neuropsych researchers that work with children. Their expertise put together the decision on scales to use as it pertains to neurocognitive testing, behaviour tests and mood tests. These tests are used broadly across children research for all manner of diseases, my understanding is that children present with diseases in different ways and this helps to identify that. The DSQ for paediatrics has a different symptom focus because of this too.

    Using scales is important in this line of work, any time we moved from standard scales we were pulled up by ethics. They are very rigorous and careful with what you present to children in question form, so they stick to standards. But also scales are very useful for comparisons across disease in this group and especially for assessing social impact. Even if a paediatric patient with ME/CFS were to get most of their physical function back they can still be quite impacted by having the disease at a younger age, as you might expect.
     
  20. MelbME

    MelbME Senior Member (Voting Rights)

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    These are conducted with neuropsychs and feedback reports are provided to families. This all works closely with the paediatricians at the hospital who continually look after these patients. It's not simply 'hey do this study" and then "thanks, see ya", which some of you may be used to doing adult research participation.
     
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