Search results

  1. Simon M

    Preprint Dissecting the genetic complexity of myalgic encephalomyelitis/chronic fatigue syndrome via deep learning-powered genome analysis, 2025, Zhang+

    Thanks for the explanation. I would still like to know how many individuals in the 247 pwme had identified LoF genes, and to see how that compares with what we know about heritability. Also, given the method, we would expect implicated genes to have a degree of consistency, as other genes that...
  2. Simon M

    Preprint Dissecting the genetic complexity of myalgic encephalomyelitis/chronic fatigue syndrome via deep learning-powered genome analysis, 2025, Zhang+

    Does the study say how many individuals had at least one of these 115 risk genes? I'm still concerned that the number of genes is much too high, given the evidence we have on heritability. We know that some of the inherited risk is through the genetic signals identified by DecodeME , and these...
  3. Simon M

    Preprint Dissecting the genetic complexity of myalgic encephalomyelitis/chronic fatigue syndrome via deep learning-powered genome analysis, 2025, Zhang+

    Thanks, that's good to know. But presumably that could substantially affect interpretation of the study if many of these repairs genes turn out not to be relevant. Do we know how many coding variants (intolerant of loss of function) a healthy person has? I'm trying to get a feel if it's a rare...
  4. Simon M

    Criticisms of DecodeME in the media - and responses to the criticisms

    Participants were asked if the infection for either infectious mononucleosis (glandular fever) or Covid had been confirmed by a test. For mono, this would be a lab test, which is often done in severe cases. I can't remember if the Covid question includes the option includes a home test. The...
  5. Simon M

    Criticisms of DecodeME in the media - and responses to the criticisms

    Okay, so this was a self-report of a healthcare professional diagnosis, supported by the DecodeME criteria, which required post-exertion malaise, a symptom pretty specific for ME/CFS. So, a fairly well defined cohort. But had it been varied, that would make it more likely to find nothing, not...
  6. Simon M

    Preprint Dissecting the genetic complexity of myalgic encephalomyelitis/chronic fatigue syndrome via deep learning-powered genome analysis, 2025, Zhang+

    I didn't have the capacity to follow this thread properly when it came out, so I I'm coming back to it now. But this has been bugging me. We know that there is a heritable component to.ME/CFS, but it's not that common. I think there's an Utah registry study that gave heritability at about...
  7. Simon M

    Autonomic Dysfunction in ME/CFS: Findings from the Multi-Site Clinical Assessment of ME/CFS (MCAM) Study in the USA, 2025, Unger et al

    Of course, and that's true of a large majority of ME/CFS studies, with DecodeME as a spectacular exception. Representative samples are rare in this field.
  8. Simon M

    Autonomic Dysfunction in ME/CFS: Findings from the Multi-Site Clinical Assessment of ME/CFS (MCAM) Study in the USA, 2025, Unger et al

    I'm sure I read that the compass – 32 questionnaire was shown to be a poor measure of objectively measured autonomic problems. But that report came out after this work would've been done. @ME/CFS Science Blog – 00 I misremembering something you posted? These are the small number of very...
  9. Simon M

    Long COVID and chronic fatigue syndrome/myalgic encephalitis share similar pathophysiologic mechanisms of exercise limitation, 2025, Jothi et al

    Thanks. That's more information that I was expecting. Yes, maybe AI will help standardise results.
  10. Simon M

    Long COVID and chronic fatigue syndrome/myalgic encephalitis share similar pathophysiologic mechanisms of exercise limitation, 2025, Jothi et al

    Can you remember any details of that, and does it refer to SFN testing in general? I had always wondered how reliable the findings were, but hadn't seen anything looking at the methodology?
  11. Simon M

    Haptoglobin phenotypes and structural variants associate with post-exertional malaise and cognitive dysfunction in [ME], 2025, Moezzi, Moreau et al

    I'm sure that's been done a few times. And quite a few of those severe ended up halfway between health controls and mild/moderate, sometimes with generous explanations of how this makes sense. Which makes me wonder if it's a case of more red herring is.
  12. Simon M

    Preprint Initial findings from the DecodeME genome-wide association study of myalgic encephalomyelitis/chronic fatigue syndrome, 2025, DecodeMe Collaboration

    Interesting analysis. Worth noting that maybe a third of pwME had depression after they relaxed the recruitment criteria. I think they are planning to do a sensitivity analysis with excluding this group. I also gather that depression has a broad signal that correlates with many things...
  13. Simon M

    Preprint Initial findings from the DecodeME genome-wide association study of myalgic encephalomyelitis/chronic fatigue syndrome, 2025, DecodeMe Collaboration

    I think sleep disturbances are in all the main case definitions, and it's one of the four core items for IOM criteria. In DecodeME data, it's close to 100% of people reporting sleep problems. This seems much higher than in other chronic illnesses (at least that don't mainly affect older people )...
  14. Simon M

    What advocacy use should be made of DecodeME results?

    I think what many ordinary people have in their minds, much the same as what medics have in their minds, is that if there isn't a clear biological explanation then it must be all in the mind. So ME/CFS is captured by the default assumption, not that people have a specific opinion on it. But if...
  15. Simon M

    Preprint Initial findings from the DecodeME genome-wide association study of myalgic encephalomyelitis/chronic fatigue syndrome, 2025, DecodeMe Collaboration

    Hi Woolie, great to see you again - though I may have missed you previously. That's true - here's one at the top of the tree on Google https://www.nature.com/articles/s41562-024-02076-3 At the same time, research studies are always strongly skewed to higher SES, amongst many things. Yet for 15...
  16. Simon M

    DecodeME Initial Results Webinar, Thurs Aug 14th, 3:30pm

    I don't know if the Webinar info on SequenceME and Long Covid has been discussed before. I found it pretty interesting transcript: CHRIS DecodeME is only finding some of the genetics. Sequence ME and Long Covid would find more of the genetics beyond what we've already found and that is...
  17. Simon M

    DecodeME in the media

    If that's what they believe, it would help to spell it out in the context of why they think DecodeME supports their current work on drugs. Each specific signal is important, a finding point pointing to biology. And for each of these, compared with controls, there is no signal in controls. P<...
  18. Simon M

    DecodeME in the media

    Re molecular biologist Marte Kathrine Viken at Oslo University Hospital (OUS), who has herself researched ME and genes. That sounds very sensible Re Prof Tronsdat I wasn’t aware that we were making any progress towards treatment. The immune system and the nervous system are very broad areas...
  19. Simon M

    Published poems by Veronica Ashenhurst, who has Severe ME

    It's a wonderful opinion piece by a medic who has clearly retained his compassion throughout his career. Combination of better hours with your poetry is powerful, and suggest that the editorial board really understand understand your poem, and hopefully the biggest issues as well. Thank you...
  20. Simon M

    DecodeME in the media

    This starts off brilliantly and cover the GWAS itself well, right up to the 8 genetic signals. At which point it veers off course. The blog ignores the analysis identifying the most likely ggene candidates and puts a lot of emphasis on associations between lother genetic findings the regions...
Back
Top Bottom