gwas

  1. Andy

    GWAS and meta-analysis identifies 49 genetic variants underlying critical COVID-19, 2023, Pairo-Castineira, Ponting, Baillie et al

    Abstract Critical illness in COVID-19 is an extreme and clinically homogeneous disease phenotype that we have previously shown1 to be highly efficient for discovery of genetic associations2. Despite the advanced stage of illness at presentation, we have shown that host genetics in patients who...
  2. cassava7

    People don’t mate randomly – but the flawed assumption that they do is an essential part of [genome wide association studies], Border & Zaitlen, 2022

    Virtually all the statistical methods researchers commonly use to assess genetic correlations assume that mating is random. That is, they assume that potential mating partners decide who they will have children with based on a roll of the dice. In reality, many factors likely influence who mates...
  3. C

    A saturated map of common genetic variants associated with human height, 2022, Yengo et al

    A saturated map of common genetic variants associated with human height Loic Yengo and others (multiple) Abstract Common single-nucleotide polymorphisms (SNPs) are predicted to collectively explain 40–50% of phenotypic variation in human height, but identifying the specific variants and...
  4. cassava7

    Stroke genetics informs drug discovery and risk prediction across ancestries, Mishra et al (GIGASTROKE consortium), 2022

    Previous genome-wide association studies (GWASs) of stroke — the second leading cause of death worldwide — were conducted predominantly in populations of European ancestry. Here, in cross-ancestry GWAS meta-analyses of 110,182 patients who have had a stroke (five ancestries, 33% non-European)...
  5. cassava7

    Genome-wide meta-analysis of depression identifies 102 independent variants and highlights the importance of the prefrontal brain…, Howard et al, 2019

    Genome-wide meta-analysis of depression identifies 102 independent variants and highlights the importance of the prefrontal brain regions Major depression is a debilitating psychiatric illness that is typically associated with low mood and anhedonia. Depression has a heritable component that...
  6. Andy

    No replication of previously reported association with genetic variants in the T cell receptor alpha (TRA) locus for (ME/CFS), 2022, Ueland et al

    Full title: No replication of previously reported association with genetic variants in the T cell receptor alpha (TRA) locus for myalgic encephalomyelitis/chronic fatigue syndrome (ME/CFS) Abstract Myalgic encephalomyelitis/chronic fatigue syndrome (ME/CFS) is a disease with a variety of...
  7. J

    Two big schizophrenia GWAS studies published in Nature

    Thread or here https://typefully.com/doctorveera/BZevgUj
  8. Trish

    New insights into the genetic etiology of Alzheimer’s disease and related dementias, 2022, Bellenguez et al.

    New insights into the genetic etiology of Alzheimer’s disease and related dementias https://www.nature.com/articles/s41588-022-01024-z Abstract Characterization of the genetic landscape of Alzheimer’s disease (AD) and related dementias (ADD) provides a unique opportunity for a better...
  9. Hoopoe

    Genetic association study in myalgic encephalomyelitis/chronic fatigue syndrome (ME/CFS) identifies several potential risk loci, 2022,Hajdarevic et al

    Largest ME/CFS genetic study to date. Three different cohorts totaling more than 2500 patients. First Immunochip study in ME/CFS. Possible implication of TPPP genetic region https://www.sciencedirect.com/science/article/pii/S0889159122000782 TPPP plays a key role in myelination of nerve cells...
  10. Andy

    GWAS of stool frequency provides insights into gastrointestinal motility and irritable bowel syndrome, 2021, Bonfiglio et al

    Highlights Genetics of gut motility via data on stool frequency in 167,875 individuals GWAS identifies 14 loci associated with stool frequency Candidate genes enriched in neurotransmitter signaling and enteric motor neurons Polygenic scores predict increased risk of irritable bowel syndrome...
  11. Simon M

    Participation bias

    Split from The course of the illness for ME patients in Norway, 2021, Schei and Angelsen The potential effect of sample biases on DecodeME Summary: there is some evidence that this could be a problem, but is not clear how big a problem and it may be possible to adjust for possible biases...
  12. Sly Saint

    Genetic contributions to self-reported tiredness, 2016, Deary et al

    " Abstract Self-reported tiredness and low energy, often called fatigue, is associated with poorer physical and mental health. Twin studies have indicated that this has a heritability between 6% and 50%. In the UK Biobank sample (N = 108 976) we carried out a genome-wide association study of...
  13. Sly Saint

    Genetic association study of psychotic experiences in UK Biobank: Psychotic experiences in UK Biobank, 2019, Hotopf et al

    " Abstract Importance Psychotic experiences, such as hallucinations and delusions, are reported by approximately 5%-10% of the general population, though only a small proportion develop psychotic disorders such as schizophrenia. Studying the genetic aetiology of psychotic experiences in the...
  14. John Mac

    Genetic Risk Factors of ME/CFS: A Critical Review. Joshua J Dibble, Simon J McGrath, Chris P Ponting. 2020

    https://academic.oup.com/hmg/article/doi/10.1093/hmg/ddaa169/5879704
  15. Sasha

    DecodeME Q&A webinar, 4pm Monday 6 July

    The amazing DecodeME ME/CFS DNA project that just got funded, is holding a webinar on 6 July. Details to be announced later, presumably - this info is from emails that went out to people who registered for updates about the study.
  16. NelliePledge

    DecodeME - UK ME/CFS DNA study underway

    Moderator note: Please note: at this point only people from the UK will be eligible to participate in the study. However people from anywhere, with or without ME/CFS, can register their interest in receiving updates about the study. People who register will receive information about...
  17. Kalliope

    Review of the Quality Control Checks Performed by Current Genome-Wide and Targeted-Genome Association Studies on ME/CFS, 2020, Sepulveda et al

    Provisionally accepted opinion article in frontiers in Pediatrics - Paediatric Neurology Review of the Quality Control Checks Performed by Current Genome-Wide and Targeted-Genome Association Studies on Myalgic Encephalomyelitis/Chronic Fatigue Syndrome by Nuno Sepulveda, Anna D. Grabowski...
  18. Andy

    Current: Genome-wide association study in (CFS/ME) to uncover the genetic susceptibility and identify biological pathways involved

    I searched but couldn't find this here, which is surprising. I've also Googled and can't find details of this elsewhere...
  19. InitialConditions

    Edinburgh Chris Ponting GWAS PhD project advert

    https://www.ed.ac.uk/inflammation-research/postgraduate-training/phd-programme/research-projects The M.E. project is one of several advertised on this page. Mentions the GWAS study....
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