Preprint Cytosolic interaction with RNA-helicase DDX39A titrates viral RNA G-quadruplex mediated α-Synuclein amyloidogenesis, 2026, Jain et al.

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Cytosolic interaction with RNA-helicase DDX39A titrates viral RNA G-quadruplex mediated α-Synuclein amyloidogenesis

Jain, Aanchal; Tripathi, Shreya; Agarwal, Cheshta; Biswas, Anubhab; Potharaju, Poojitha Sai; De, Aratrika; Mansuri, Shemin; Mondal, Arindam; Harshan, Krishnan H; Raychaudhuri, Swasti

Abstract
Amyloid aggregates of α -Synuclein are hallmark of Parkinsons Disease (PD) and related neurodegenerative diseases. α -Synuclein, being an non-canonical RNA-binding protein (RBP), associates with other RBPs within cytosolic RNA-protein granules to modulate mRNA-stability. Conversely, mRNA G-quadruplexes (rG4s) expedite α -Synuclein amyloidogenesis. However, spatiotemporal control on α -Synuclein amyloidogenesis by other RBPs remains unexplored.

Here, we report that RNA-dependent cytosolic interaction with DEAD-box RNA-helicase DDX39A decelerates α -Synuclein amyloidogenesis. Viral infections transiently elevate rG4s in cytoplasm. Perturbing interactions between α -Synuclein and DDX39A using viral rG4s from H1N1-influenza and SARS-CoV-2 genomes expedites intracellular amyloidogenesis. Conversely, DDX39A overexpression alleviates α -Synuclein amyloidogenesis in mouse primary neurons triggered by SARS-CoV-2 infection.

We demonstrate that while DDX39A unwinds viral rG4s to mitigate α -Synuclein sol-gel transition, its reciprocal cooperative phase separation with α -Synuclein enhances the helicases rG4-unwinding activity. We propose that accelerated α -Synuclein amyloidogenesis represents a trade-off within this RNA-protein interaction equilibrium, contributing to the viral etiology of PD.

Web | DOI | bioRxiv | Open Access
 
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